These files are related to Pathway Association Analysis Trey Ideker UCSD A working network map of the cell Network evolutionary comparison / cross-species alignment to identify conserved modules The Working Map Network-based.. Just preview or download the desired file.
... Analysis. Trey Ideker UCSD ... Network evolutionary comparison / cross-species alignment to identify conserved modules. Projection of ... gene families. Network-based classification ... A working network
Feb 8, 2005 - comparative analysis multiple alignment protein network yeast two- ... cluster) versus its likelihood given that each species' interaction map.
Trey Ideker and Roded Sharan ... study of molecular evolution, to gain insight into the robustness of cells to perturbation, and ... mapping the networks of interactions that take place among .... work
Sep 19, 2010 - chaperones and maPK pathways and identified mUC 2 as the human analog to ... networks based on functional refinement of experimentally ... This work involved four steps: ... modules and
Jan 27, 2006 - Sourav Bandyopadhyay, Roded Sharan and Trey Ideker ... Systematic identification of functional orthologs based on protein ... protein interaction networks of two species are aligned by
Apr 1, 2011 - Mitogen Activated Protein Kinase (MAPK) pathways form the backbone of ... *Corresponding authors: Trey Ideker, Ph: 858-822-4558, ... (3) A specific analysis of the MAPK network to identify
Jun 7, 2012 - Peter J. Espenshade,8 Trey Ideker,11,12 and Nevan J. Krogan1,4,16,* ... To date, cross-species comparisons of genetic ... GI networks are a natural complement to PPI maps and ... processes
Apr 6, 2006 - Roded Sharan1 & Trey Ideker2 ... multiple alignment, evolutionary models for similarity scoring and ... action maps of multiple species, network comparison itself .... species. Identification